BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A09LP1|AL426455
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1020 1604 0.0
>3x_Contig1020
Length = 4879
Score = 1604 bits (809), Expect = 0.0
Identities = 823/825 (99%), Gaps = 2/825 (0%)
Strand = Plus / Plus
Query: 1 gatcatcaatatttccattctttggcatcttctcgtggtgaacatcctttatgggattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1856 gatcatcaatatttccattctttggcatcttctcgtggtgaacatcctttatgggattct 1915
Query: 61 aggctatttaactatgggcattttgaagtacaaagattcctacttgctaatctagcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1916 aggctatttaactatgggcattttgaagtacaaagattcctacttgctaatctagcattt 1975
Query: 121 tacattgatgtgtatcaatttgacgggttcagattcgatggtgtaacatcaatgctatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1976 tacattgatgtgtatcaatttgacgggttcagattcgatggtgtaacatcaatgctatac 2035
Query: 181 ttgcatcatggtgttggtgaaggtggtgccttcagtggtgattacaatgagtacttatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2036 ttgcatcatggtgttggtgaaggtggtgccttcagtggtgattacaatgagtacttatct 2095
Query: 241 agtgaaagatcttttgttgatcatgaggccttggcatacttgatgttagctaatgacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2096 agtgaaagatcttttgttgatcatgaggccttggcatacttgatgttagctaatgacctt 2155
Query: 301 gtcagagaattgttaccagacaacggaatcaccattgcagaagacgtttcagggtatccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2156 gtcagagaattgttaccagacaacggaatcaccattgcagaagacgtttcagggtatccg 2215
Query: 361 actctttgtatgccacgtcatctgggaggcgctggttttgattaccgtctagcaatggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2216 actctttgtatgccacgtcatctgggaggcgctggttttgattaccgtctagcaatggcg 2275
Query: 421 ttacctgatatgtggatcaaacttttgaaagaaagcagagacgaggactgggaaatgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2276 ttacctgatatgtggatcaaacttttgaaagaaagcagagacgaggactgggaaatgggt 2335
Query: 481 catattgttcacaccttggtaaatagaaggcaccgtgaaaaggttgtcgcatatacggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 catattgttcacaccttggtaaatagaaggcaccgtgaaaaggttgtcgcatatacggaa 2395
Query: 541 tctcatgatcaggctttggttggtgataagaccttggcattctggttgatggatgcggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2396 tctcatgatcaggctttggttggtgataagaccttggcattctggttgatggatgcggcc 2455
Query: 601 atgtataccgatatgacaattttgaaagagtccacgccagttgttgaccgtggtattgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2456 atgtataccgatatgacaattttgaaagagtccacgccagttgttgaccgtggtattgct 2515
Query: 661 ttgcacaagcttattagactaattacccactctttaggtggtgaagcttatt-tgaactt 719
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2516 ttgcacaagcttattagactaattacccactctttaggtggtgaagcttattatgaactt 2575
Query: 720 tg-aaggtaacgagtttggtcaccctgaatggttggatttccctaacgttaacaacggcg 778
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 tgcaaggtaacgagtttggtcaccctgaatggttggatttccctaacgttaacaacggcg 2635
Query: 779 atagttaccattatgctagaaggcagttcaacttggtggatgacc 823
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2636 atagttaccattatgctagaaggcagttcaacttggtggatgacc 2680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5556
Number of Sequences: 1807
Number of extensions: 5556
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)